jamimmunology

My thoughts on immunology, T-cell receptors, next-generation sequencing, molecular biology, and anything else that takes my fancy.

Tuesday, 8 January 2019

3D printing lab ware

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I’ve been interesting in 3D printing and its application in the lab for a while now . I’ve argued elsewhere online about how...
Saturday, 10 November 2018

Making coding T cell receptor sequences from V-J-CDR3

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If, like me, you work on T cell receptors, occasionally you’re probably going to want to express a particular TCR in cells. However you...
Tuesday, 4 September 2018

The problem with Adaptive TCR data

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I ' m a big proponent of DIY TCR (and BCR) sequencing. It's the best way to be able to vouch that every step in the p...
Sunday, 29 July 2018

3D printed 15 to 50 ml tube rotator converter

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Sometimes you just need to leave something in the lab, but you might not always have the right sized rotator brackets. This is the situation...
Sunday, 11 February 2018

High-throughput immunopeptidomics

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In my PhD I focused on studying the complexity of the immune system at the level of the T cell repeptor. Recently I’ve been getting in to wh...
Thursday, 8 February 2018

Bulk downloading proteome files from UniProt using Python

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It's that time again, where the following has happened: I want to do some niche bioinformatics related thing I cobble together a quic...
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Jamie Heather
I'm a post-doc working in the Cobbold lab at MGH in Boston. I'm interesting in T cell receptors and transcriptomes, and how these can both be used to gain knowledge about immune responses and potentially tweak the nature of future responses.
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